Forecasting Dengue

Dengue is a vector borne disease that affects many people in the tropics and subtropics. In its most severe form, dengue hemmoragic fever (DHF), patients bleed and suffer greatly. This affects mainly the very young and the very old.

Predicting outbreaks can help in planning, eg. in vector control before an outbreak occurs. We present a two selected articles by our students which illustrate both a good analysis of the forecasting problem and with a good solution.

Team Mopiko 2.0: Whitepaper Video

Team Skywalker: Whitepaper Video

The Dengue forecasting problem is available for you to tackle in Autocaffe. Sign up for membership to get a free account.

Our Comments on the Solutions

Both submissions impressed us with their well-reasoned approach to the problem, in particular, the innovative and insightful feature engineering methods used by each team.

Noble and Tingyu (Team Skywalker) presenting their solution

Missing Data

One problem faced by both teams was how to deal with the substantial amount of missing data in some weather stations:

Feature Selection

With data from more than fifty weather stations given, both teams came up with their own method to do feature selection or dimensional reduction.

Other Factors

Regardless of the approach used, domain knowledge was critical in the design of the features. Both teams windowed their input data in sizes that were informed by their knowledge of dengue transmission cycles and seasonal patterns of weather in Singapore.

Another unavoidable factor is experimentation, which both teams did in abundance, not only during feature engineering but also when deciding on the neural network architecture, performing hundreds of trials before finally settling on their optimal models.